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ERX5108928: Illumina NovaSeq 6000 paired end sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 262,723 spots, 79.3M bases, 23.2Mb downloads

Submitted by: CNAG-CRG
Study: Comprehensive genomic survey of carbapenem-resistant Enterobacteriaceae in Spain
show Abstracthide Abstract
To get a wide view of the distribution, the characteristics and the mechanisms of resistance to carbapenem in Enterobacteria in Spain, 461 strains were isolated from 41 Spanish hospitals and sequenced both with long and short reads to perform hybrid assemblies which allowed us to define their genetic characteristics, the genomic mechanisms which bear the carbapenemase-enzymes, the mechanisms associated with other antimicrobials, the molecular epidemiology of 16S rRNA methyltransferases, and to define the gene clusters implicated in the successful spread of K. pneumoniae ST-15 in Spain.
Sample: AI2891 DNA
SAMEA8065749 • ERS5752920 • All experiments • All runs
Library:
Name: AI2891_3
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: The short-insert paired-end libraries for the whole genome sequencing were prepared with PCR free protocol using KAPA HyperPrep kit (Roche) with some modifications
Runs: 1 run, 262,723 spots, 79.3M bases, 23.2Mb
Run# of Spots# of BasesSizePublished
ERR5319525262,72379.3M23.2Mb2021-10-20

ID:
17168839

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